Correct me if I'm wrong, but I think SGA has an AI in it because Pannin reasoned that as long as a mind could perceive him, he must exist. He built in in response to the powers in the vault that could delete you from existence.
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Possibly. The reason we are all taught was that he became frightened of traveling alone, but there might be something deeper
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Very cool lore. Wish SGA did talked to you in the game. Actually it would be cool if the story had a fraction of the awesome things discussed in this thread.